Rosetta/main/source/bin/score_jd2.default.linuxgccrelease -database Rosetta/main/database -in:file:silent BRD4_broker_cst_all.out -in:file:silent_struct_type binary -in:file:residue_type_set centroid -out:output -out:file:silent BRD4_broker_cst_all_rescore.out -out:file:silent_struct_type binary -out:file:residue_type_set centroid -in:file:spanfile BRD4A.span -score:weights score_epr_cst_membrane -evaluation:rmsd S_0185_1_0001.pdb _TM_low BRD4A_TM_rms.txt -constraints:cst_file BRD4A_example.cst -constraints:cst_weight 10 -constraints:epr_distance -residues:patch_selectors CENTROID_HA
